{"alphafill_version":"2.1.0","date":"2023-12-01","file":"\/DATA\/afdb-v4\/\/Q8\/AF-Q8IDB6-F1-model_v4.cif.gz","hits":[{"alignment":{"af_start":466,"identity":0.338129,"length":556,"pdb_start":127},"global_rmsd":2.5829,"pdb_asym_id":"A","pdb_id":"7TUV","transplants":[{"analogue_id":"U5P","asym_id":"B","clash":{"clash_count":13,"distances":[{"VdW_overlap":0,"distance":3.63995,"poly_atom":{"id":"CG","seq_id":608},"res_atom_id":"C4'"},{"VdW_overlap":0.0120232,"distance":3.20798,"poly_atom":{"id":"CG","seq_id":608},"res_atom_id":"O4'"},{"VdW_overlap":0,"distance":3.96161,"poly_atom":{"id":"CG","seq_id":608},"res_atom_id":"C5'"},{"VdW_overlap":0,"distance":3.91801,"poly_atom":{"id":"CD","seq_id":608},"res_atom_id":"C4'"},{"VdW_overlap":0,"distance":3.97136,"poly_atom":{"id":"CD","seq_id":608},"res_atom_id":"O4'"},{"VdW_overlap":0,"distance":3.75874,"poly_atom":{"id":"CD","seq_id":608},"res_atom_id":"C5'"},{"VdW_overlap":0,"distance":3.72124,"poly_atom":{"id":"SG","seq_id":611},"res_atom_id":"C4'"},{"VdW_overlap":0,"distance":3.57023,"poly_atom":{"id":"SG","seq_id":611},"res_atom_id":"O3'"},{"VdW_overlap":0.123536,"distance":3.37646,"poly_atom":{"id":"SG","seq_id":611},"res_atom_id":"C5'"},{"VdW_overlap":0.143641,"distance":3.17636,"poly_atom":{"id":"SG","seq_id":611},"res_atom_id":"O5'"},{"VdW_overlap":0,"distance":3.98926,"poly_atom":{"id":"C","seq_id":613},"res_atom_id":"O2P"},{"VdW_overlap":0,"distance":3.55492,"poly_atom":{"id":"O","seq_id":613},"res_atom_id":"O5'"},{"VdW_overlap":0,"distance":3.64569,"poly_atom":{"id":"O","seq_id":613},"res_atom_id":"P"},{"VdW_overlap":0.277277,"distance":2.76272,"poly_atom":{"id":"O","seq_id":613},"res_atom_id":"O2P"},{"VdW_overlap":0,"distance":3.52763,"poly_atom":{"id":"CG","seq_id":613},"res_atom_id":"O3'"},{"VdW_overlap":0,"distance":3.56247,"poly_atom":{"id":"CG","seq_id":613},"res_atom_id":"O3P"},{"VdW_overlap":0.193388,"distance":2.84661,"poly_atom":{"id":"OD1","seq_id":613},"res_atom_id":"O3'"},{"VdW_overlap":0,"distance":3.61213,"poly_atom":{"id":"OD2","seq_id":613},"res_atom_id":"O3'"},{"VdW_overlap":0,"distance":3.91382,"poly_atom":{"id":"OD2","seq_id":613},"res_atom_id":"O5'"},{"VdW_overlap":0,"distance":3.81614,"poly_atom":{"id":"OD2","seq_id":613},"res_atom_id":"P"},{"VdW_overlap":0.310051,"distance":2.72995,"poly_atom":{"id":"OD2","seq_id":613},"res_atom_id":"O3P"},{"VdW_overlap":0,"distance":3.95575,"poly_atom":{"id":"N","seq_id":615},"res_atom_id":"O2P"},{"VdW_overlap":0,"distance":3.85948,"poly_atom":{"id":"CB","seq_id":615},"res_atom_id":"O2P"},{"VdW_overlap":0,"distance":3.46973,"poly_atom":{"id":"CG","seq_id":615},"res_atom_id":"O2P"},{"VdW_overlap":0,"distance":3.79567,"poly_atom":{"id":"OD2","seq_id":615},"res_atom_id":"P"},{"VdW_overlap":0.402186,"distance":2.63781,"poly_atom":{"id":"OD2","seq_id":615},"res_atom_id":"O2P"},{"VdW_overlap":0,"distance":3.9932,"poly_atom":{"id":"CB","seq_id":666},"res_atom_id":"N3"},{"VdW_overlap":0,"distance":3.92592,"poly_atom":{"id":"CG","seq_id":666},"res_atom_id":"C2"},{"VdW_overlap":0,"distance":3.74206,"poly_atom":{"id":"CG","seq_id":666},"res_atom_id":"N3"},{"VdW_overlap":0,"distance":3.85844,"poly_atom":{"id":"CD1","seq_id":666},"res_atom_id":"C2'"},{"VdW_overlap":0,"distance":3.7407,"poly_atom":{"id":"CD2","seq_id":666},"res_atom_id":"N3"},{"VdW_overlap":0,"distance":3.59402,"poly_atom":{"id":"CD2","seq_id":666},"res_atom_id":"C4"},{"VdW_overlap":0,"distance":3.76742,"poly_atom":{"id":"CD2","seq_id":666},"res_atom_id":"O4"},{"VdW_overlap":0,"distance":3.5704,"poly_atom":{"id":"CE1","seq_id":666},"res_atom_id":"C2'"},{"VdW_overlap":0,"distance":3.7548,"poly_atom":{"id":"CE1","seq_id":666},"res_atom_id":"C3'"},{"VdW_overlap":0,"distance":3.81715,"poly_atom":{"id":"CE2","seq_id":666},"res_atom_id":"C4"},{"VdW_overlap":0,"distance":3.73396,"poly_atom":{"id":"CE2","seq_id":666},"res_atom_id":"C5"},{"VdW_overlap":0,"distance":3.91737,"poly_atom":{"id":"OH","seq_id":666},"res_atom_id":"P"},{"VdW_overlap":0.602553,"distance":2.43745,"poly_atom":{"id":"OH","seq_id":666},"res_atom_id":"O3P"},{"VdW_overlap":0,"distance":3.99439,"poly_atom":{"id":"CZ","seq_id":666},"res_atom_id":"C6"},{"VdW_overlap":0,"distance":3.46493,"poly_atom":{"id":"CZ","seq_id":666},"res_atom_id":"O3P"},{"VdW_overlap":0,"distance":3.97814,"poly_atom":{"id":"CG","seq_id":921},"res_atom_id":"O3P"},{"VdW_overlap":0.0751925,"distance":3.42481,"poly_atom":{"id":"CD","seq_id":921},"res_atom_id":"P"},{"VdW_overlap":0,"distance":3.44613,"poly_atom":{"id":"CD","seq_id":921},"res_atom_id":"O1P"},{"VdW_overlap":0,"distance":3.76846,"poly_atom":{"id":"CD","seq_id":921},"res_atom_id":"O2P"},{"VdW_overlap":0.40196,"distance":2.81804,"poly_atom":{"id":"CD","seq_id":921},"res_atom_id":"O3P"},{"VdW_overlap":0,"distance":3.43405,"poly_atom":{"id":"NE","seq_id":921},"res_atom_id":"P"},{"VdW_overlap":0.117752,"distance":2.95225,"poly_atom":{"id":"NE","seq_id":921},"res_atom_id":"O1P"},{"VdW_overlap":0,"distance":3.62916,"poly_atom":{"id":"NE","seq_id":921},"res_atom_id":"O2P"},{"VdW_overlap":0,"distance":3.4618,"poly_atom":{"id":"NE","seq_id":921},"res_atom_id":"O3P"},{"VdW_overlap":0,"distance":3.9034,"poly_atom":{"id":"NH1","seq_id":921},"res_atom_id":"C4"},{"VdW_overlap":0.0959187,"distance":3.15408,"poly_atom":{"id":"NH1","seq_id":921},"res_atom_id":"C5"},{"VdW_overlap":0,"distance":3.81904,"poly_atom":{"id":"NH1","seq_id":921},"res_atom_id":"O4"},{"VdW_overlap":0,"distance":3.69951,"poly_atom":{"id":"NH1","seq_id":921},"res_atom_id":"O1P"},{"VdW_overlap":0,"distance":3.63739,"poly_atom":{"id":"NH2","seq_id":921},"res_atom_id":"O1P"},{"VdW_overlap":0,"distance":3.98362,"poly_atom":{"id":"CZ","seq_id":921},"res_atom_id":"C5"},{"VdW_overlap":0.0318637,"distance":3.18814,"poly_atom":{"id":"CZ","seq_id":921},"res_atom_id":"O1P"}],"poly_atom_count":26,"score":0.129952,"transplant_atom_count":21},"compound_id":"U5P","local_rmsd":0.415484,"pae":{"matrix":[[0,1,2,2,3,3],[4,0,2,2,5,4],[3,2,0,2,4,3],[2,2,1,0,4,2],[3,3,2,3,0,2],[3,3,3,2,2,0]],"mean":2.63333,"median":2.5,"stddev":0.11563},"pdb_asym_id":"C","pdb_auth_asym_id":"A","pdb_auth_ins_code":null,"pdb_auth_seq_id":"1001"},{"analogue_id":"MG","asym_id":"C","clash":{"clash_count":1,"distances":[{"VdW_overlap":0,"distance":3.3429,"poly_atom":{"id":"CG","seq_id":607}},{"VdW_overlap":0.0846939,"distance":2.15531,"poly_atom":{"id":"OD1","seq_id":607}},{"VdW_overlap":0,"distance":3.99443,"poly_atom":{"id":"OD2","seq_id":607}},{"VdW_overlap":0,"distance":3.63951,"poly_atom":{"id":"N","seq_id":615}},{"VdW_overlap":0,"distance":3.97406,"poly_atom":{"id":"N","seq_id":616}},{"VdW_overlap":0,"distance":3.77638,"poly_atom":{"id":"CG","seq_id":616}},{"VdW_overlap":0,"distance":2.90405,"poly_atom":{"id":"OD1","seq_id":616}}],"poly_atom_count":7,"score":0.0320113,"transplant_atom_count":1},"compound_id":"MG","local_rmsd":0.338416,"pae":{"matrix":[[0,2,2],[2,0,1],[2,1,0]],"mean":1.66667,"median":2,"stddev":0.272166},"pdb_asym_id":"D","pdb_auth_asym_id":"A","pdb_auth_ins_code":null,"pdb_auth_seq_id":"1002"},{"analogue_id":"MG","asym_id":"D","clash":{"clash_count":1,"distances":[{"VdW_overlap":0,"distance":2.90918,"poly_atom":{"id":"CB","seq_id":615}},{"VdW_overlap":0,"distance":2.58335,"poly_atom":{"id":"CG","seq_id":615}},{"VdW_overlap":0,"distance":3.73729,"poly_atom":{"id":"OD1","seq_id":615}},{"VdW_overlap":0.571056,"distance":1.66894,"poly_atom":{"id":"OD2","seq_id":615}},{"VdW_overlap":0,"distance":3.51115,"poly_atom":{"id":"CB","seq_id":918}},{"VdW_overlap":0,"distance":3.25716,"poly_atom":{"id":"OG","seq_id":918}},{"VdW_overlap":0,"distance":3.49679,"poly_atom":{"id":"CD","seq_id":921}},{"VdW_overlap":0,"distance":2.80342,"poly_atom":{"id":"NE","seq_id":921}},{"VdW_overlap":0,"distance":3.7777,"poly_atom":{"id":"NH2","seq_id":921}},{"VdW_overlap":0,"distance":3.67183,"poly_atom":{"id":"CZ","seq_id":921}}],"poly_atom_count":10,"score":0.180584,"transplant_atom_count":1},"compound_id":"MG","local_rmsd":0.328636,"pae":{"matrix":[[0,1,2],[1,0,1],[2,1,0]],"mean":1.33333,"median":1,"stddev":0.136083},"pdb_asym_id":"E","pdb_auth_asym_id":"A","pdb_auth_ins_code":null,"pdb_auth_seq_id":"1003"}]},{"alignment":{"af_start":15,"identity":0.252252,"length":222,"pdb_start":22},"global_rmsd":5.09219,"pdb_asym_id":"J","pdb_id":"4IFD","transplants":[{"analogue_id":"ZN","asym_id":"E","clash":{"clash_count":3,"distances":[{"VdW_overlap":0,"distance":3.16799,"poly_atom":{"id":"CB","seq_id":43}},{"VdW_overlap":0,"distance":2.69285,"poly_atom":{"id":"SG","seq_id":43}},{"VdW_overlap":0,"distance":3.57407,"poly_atom":{"id":"CB","seq_id":48}},{"VdW_overlap":0.249949,"distance":2.29005,"poly_atom":{"id":"SG","seq_id":48}},{"VdW_overlap":0,"distance":3.69947,"poly_atom":{"id":"N","seq_id":51}},{"VdW_overlap":0,"distance":3.55098,"poly_atom":{"id":"CB","seq_id":51}},{"VdW_overlap":0.327919,"distance":2.21208,"poly_atom":{"id":"SG","seq_id":51}},{"VdW_overlap":0,"distance":3.7814,"poly_atom":{"id":"CB","seq_id":177}},{"VdW_overlap":0,"distance":3.24412,"poly_atom":{"id":"CG","seq_id":177}},{"VdW_overlap":0.229322,"distance":2.21068,"poly_atom":{"id":"CD2","seq_id":177}},{"VdW_overlap":0,"distance":3.11763,"poly_atom":{"id":"NE2","seq_id":177}}],"poly_atom_count":11,"score":0.142253,"transplant_atom_count":1},"compound_id":"ZN","local_rmsd":1.01077,"pae":{"matrix":[[0,2,2,3],[4,0,4,3],[4,3,0,4],[4,4,3,0]],"mean":3.33333,"median":3.5,"stddev":0.096225},"pdb_asym_id":"AD","pdb_auth_asym_id":"J","pdb_auth_ins_code":null,"pdb_auth_seq_id":"1106"}]},{"alignment":{"af_start":419,"identity":0.338736,"length":617,"pdb_start":345},"global_rmsd":3.79543,"pdb_asym_id":"J","pdb_id":"5JEA","transplants":[{"analogue_id":"NA","asym_id":"F","clash":{"clash_count":0,"distances":[{"VdW_overlap":0,"distance":3.35393,"poly_atom":{"id":"CE1","seq_id":577}},{"VdW_overlap":0,"distance":2.73544,"poly_atom":{"id":"OH","seq_id":577}},{"VdW_overlap":0,"distance":3.47181,"poly_atom":{"id":"CZ","seq_id":577}},{"VdW_overlap":0,"distance":3.70014,"poly_atom":{"id":"N","seq_id":677}}],"poly_atom_count":4,"score":0,"transplant_atom_count":1},"compound_id":"NA","local_rmsd":0.228376,"pae":{"matrix":[[0,2],[2,0]],"mean":2,"median":2,"stddev":0},"pdb_asym_id":"X","pdb_auth_asym_id":"J","pdb_auth_ins_code":null,"pdb_auth_seq_id":"1103"}]},{"alignment":{"af_start":419,"identity":0.333874,"length":617,"pdb_start":100},"global_rmsd":3.3261,"pdb_asym_id":"B","pdb_id":"2VNU","transplants":[{"analogue_id":"NA","asym_id":"G","clash":{"clash_count":2,"distances":[{"VdW_overlap":0,"distance":3.58011,"poly_atom":{"id":"C","seq_id":605}},{"VdW_overlap":0,"distance":3.48766,"poly_atom":{"id":"CB","seq_id":605}},{"VdW_overlap":0,"distance":3.66388,"poly_atom":{"id":"O","seq_id":605}},{"VdW_overlap":0.133491,"distance":2.40651,"poly_atom":{"id":"OG","seq_id":605}},{"VdW_overlap":0,"distance":3.80109,"poly_atom":{"id":"N","seq_id":606}},{"VdW_overlap":0,"distance":3.4756,"poly_atom":{"id":"N","seq_id":607}},{"VdW_overlap":0,"distance":3.94681,"poly_atom":{"id":"CA","seq_id":607}},{"VdW_overlap":0,"distance":3.13106,"poly_atom":{"id":"CB","seq_id":607}},{"VdW_overlap":0,"distance":2.96373,"poly_atom":{"id":"CG","seq_id":607}},{"VdW_overlap":0.456361,"distance":2.08364,"poly_atom":{"id":"OD2","seq_id":607}},{"VdW_overlap":0,"distance":3.95814,"poly_atom":{"id":"CD1","seq_id":614}},{"VdW_overlap":0,"distance":3.97735,"poly_atom":{"id":"CA","seq_id":722}},{"VdW_overlap":0,"distance":3.64203,"poly_atom":{"id":"CB","seq_id":722}},{"VdW_overlap":0,"distance":3.96397,"poly_atom":{"id":"OG","seq_id":722}},{"VdW_overlap":0,"distance":3.86723,"poly_atom":{"id":"N","seq_id":723}},{"VdW_overlap":0,"distance":3.39165,"poly_atom":{"id":"O","seq_id":723}}],"poly_atom_count":16,"score":0.118871,"transplant_atom_count":1},"compound_id":"NA","local_rmsd":0.327645,"pae":{"matrix":[[0,1,1,1,1,1],[1,0,1,2,1,1],[1,1,0,2,2,1],[2,2,2,0,2,2],[2,1,2,2,0,1],[1,1,1,2,1,0]],"mean":1.4,"median":1,"stddev":0.0730297},"pdb_asym_id":"D","pdb_auth_asym_id":"D","pdb_auth_ins_code":null,"pdb_auth_seq_id":"1501"}]},{"alignment":{"af_start":594,"identity":0.252212,"length":226,"pdb_start":188},"global_rmsd":3.0871,"pdb_asym_id":"A","pdb_id":"2ID0","transplants":[{"analogue_id":"MN","asym_id":"H","clash":{"clash_count":0,"distances":[{"VdW_overlap":0,"distance":3.97147,"poly_atom":{"id":"CG","seq_id":607}},{"VdW_overlap":0,"distance":2.79346,"poly_atom":{"id":"OD1","seq_id":607}},{"VdW_overlap":0,"distance":3.32844,"poly_atom":{"id":"CG","seq_id":616}},{"VdW_overlap":0,"distance":2.30877,"poly_atom":{"id":"OD1","seq_id":616}},{"VdW_overlap":0,"distance":3.86922,"poly_atom":{"id":"OD2","seq_id":616}}],"poly_atom_count":5,"score":0,"transplant_atom_count":1},"compound_id":"MN","local_rmsd":0.370206,"pae":{"matrix":[[0,2],[2,0]],"mean":2,"median":2,"stddev":0},"pdb_asym_id":"E","pdb_auth_asym_id":"A","pdb_auth_ins_code":null,"pdb_auth_seq_id":"1001"}]}],"id":"AF-Q8IDB6-F1"}